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Intron Name: Anas_platyrhynchos_platyrhynchos_19_3984547_3984847_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3984547 - 3984847

Intron Length:

301

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGCA

5'SS Class:

strong_major

3'SS Sequence:

ATATTTATAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

ATATTTATAACA

Flanking Amino Acid:

AQELYAYVQKAFGMDAEEHR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

71.1

34.7

Major BPS

88.7

0.96

0.8

36.5

Major PPT

72.1

0.5

67.5

41.8

Minor 5ss

26.1

-2.7

3.2

42.6

Minor BPS

61.2

0.35

1.5

71.2

34.3

Associated Gene:

Gene:

UNC13D

Ensembl Gene ID:

ENSAPLG00000015199

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022639

3974360 - 3985237

10878

ENSAPLT00000015883

3974360 - 3987179

12820