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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4007832_4009120_R

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

4007832 - 4009120

Intron Length:

1289

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACC|GTTTCTTCT

5'SS Class:

weak_minor

3'SS Sequence:

CGGAAAGGAGCAG|G

3'SS Class:

degenerate_minor

U2 Branch Point Sequence:

AGAAAAT

U12 Branch Point Sequence:

TGCTGCAGAAAA

Flanking Amino Acid:

GPKRPPVKGDREYQSREGWG

Intron Amino Acid Position:

379

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

45.1

-0.3

1.5

48.4

42.7

Major BPS

48.6

-0

1.2

53.4

38.7

Major PPT

46.2

-0.2

1.1

32.5

Minor 5ss

59.5

0.32

1.9

73.8

Minor BPS

42.9

-0.5

2.1

55.52

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018146

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018036

4007131 - 4014204

7074