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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4009160_4009445_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4009160 - 4009445

Intron Length:

286

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCGTCGACG

5'SS Class:

major

3'SS Sequence:

GGCCCTGCGGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AACAAAC

U12 Branch Point Sequence:

CAGCCTGGGAGT

Flanking Amino Acid:

KKQWDRLQGKGGEGPKRPPV

Intron Amino Acid Position:

366

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.4

0.34

1.2

56.9

42.5

Major BPS

50.8

0.02

0.9

25.1

Major PPT

43.5

-0.3

1.7

41.9

38.5

Minor 5ss

28.4

-2.5

3.9

39.9

45.9

Minor BPS

35.8

-1

2.1

45.22

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018146

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018036

4007131 - 4014204

7074