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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4014548_4015946_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4014548 - 4015946

Intron Length:

1399

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGT|GTCTGTGTG

5'SS Class:

weak_major

3'SS Sequence:

TAAACCGCTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTAAAC

U12 Branch Point Sequence:

GTAGCTTAAACC

Flanking Amino Acid:

AAAPPQAGARVWREPGAVKV

Intron Amino Acid Position:

285

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.3

0.03

1.4

52.7

44.4

Major BPS

60.1

0.25

1.1

68.6

33.3

Major PPT

62.7

0.29

51.4

43.2

Minor 5ss

39.8

-1.1

3.2

46.3

Minor BPS

0.1

1.8

63.51

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018146

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025536

4009789 - 4021856

12068