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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4016353_4016894_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4016353 - 4016894

Intron Length:

542

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGGGAGGC

5'SS Class:

major

3'SS Sequence:

CTCGGCGTTGGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGGTGAT

U12 Branch Point Sequence:

GATGCCGTGACC

Flanking Amino Acid:

HSRKQVGNWGATGGSALGLT

Intron Amino Acid Position:

150

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.9

0.37

1.1

51.6

40.2

Major BPS

57.3

0.18

1.3

48.8

46.3

Major PPT

48.6

-0

1.7

41.5

Minor 5ss

24.4

-2.9

3.4

32.4

42.6

Minor BPS

49.5

-0

2.2

63.32

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018146

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025536

4009789 - 4021856

12068