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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4017325_4021838_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4017325 - 4021838

Intron Length:

4514

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGATGTGA

5'SS Class:

major

3'SS Sequence:

CATCTCGCCCAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTCCAT

U12 Branch Point Sequence:

CTTTGTCCATCT

Flanking Amino Acid:

LAAQSELEEKLVCSIC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

64.6

37.7

Major BPS

62.1

0.3

1.4

72.5

43.5

Major PPT

55.9

0.13

1.1

52.5

36.7

Minor 5ss

30.7

-2.2

3.2

38.6

46.4

Minor BPS

41.1

-0.6

2.3

64.33

46.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018146

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025536

4009789 - 4021856

12068