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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4022003_4022334_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4022003 - 4022334

Intron Length:

332

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGTGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTACGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TTGTCTTTACGT

Flanking Amino Acid:

YYGNMVTPTEAFNPPEVSYE

Intron Amino Acid Position:

162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

70.1

35.9

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

75.6

0.58

0.9

74.4

35.4

Minor 5ss

32.7

-2

3.1

39.1

46.7

Minor BPS

59.8

0.39

1.9

79.01

43.8

Associated Gene:

Gene:

MRPL38

Ensembl Gene ID:

ENSAPLG00000015690

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028152

4019799 - 4024505

4707

ENSAPLT00000016352

4019799 - 4023436

3638