Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_4024248_4024551_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4024248 - 4024551

Intron Length:

304

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAG

U12 Branch Point Sequence:

CGCTCCTGAGCC

Flanking Amino Acid:

LLLLKHRAQQDRDFLEDEHF

Intron Amino Acid Position:

1109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.8

72.2

39.5

Major BPS

54.8

0.12

1.6

53.3

44.2

Major PPT

78.6

0.64

0.7

76.4

25.7

Minor 5ss

26.6

-2.7

31.5

42.8

Minor BPS

51.3

0.02

1.8

60.02

44.8

Associated Gene:

Gene:

FBF1

Ensembl Gene ID:

ENSAPLG00000015809

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032946

4024164 - 4037918

13755

ENSAPLT00000016519

4024164 - 4037918

13755