Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_4025705_4026439_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4025705 - 4026439

Intron Length:

735

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGGCCC

5'SS Class:

major

3'SS Sequence:

ACGCCCATCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACACAT

U12 Branch Point Sequence:

GGTCTGGTAACA

Flanking Amino Acid:

REGTIMSLAKEQAELKMRGR

Intron Amino Acid Position:

924

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.1

63.1

39.8

Major BPS

61.1

0.28

29.8

Major PPT

61.6

0.26

0.9

37.3

Minor 5ss

30.9

-2.2

3.4

42.7

44.4

Minor BPS

43.1

-0.5

2.5

57.82

41.5

Associated Gene:

Gene:

FBF1

Ensembl Gene ID:

ENSAPLG00000015809

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032946

4024164 - 4037918

13755

ENSAPLT00000016519

4024164 - 4037918

13755