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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4030107_4030383_R


Intron Information:

Intron Rank:
14

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
4030107 - 4030383

Intron Length:
277

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGG|GTGAGGCTT

5'SS Class:
major

3'SS Sequence:
TGTGTCCATGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GCATCAT

U12 Branch Point Sequence:
TGTGCATCATTC

Flanking Amino Acid:
QDKAESSDSSGHPVPWLSTA

Intron Amino Acid Position:
484

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77
0.64
1
69.5
42.7

Major BPS
57.9
0.2
1.4
62
44.2

Major PPT
73.2
0.52
1
66.8
39.6

Minor 5ss
30.8
-2.2
3.5
39.2
46.1

Minor BPS
43.9
-0.4
2
56.58
42

Associated Gene:

Gene:
FBF1

Ensembl Gene ID:

Chromosome:
19

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4024164 - 4037918
13755

4024164 - 4037918
13755