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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4043940_4044026_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4043940 - 4044026

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TTGTATCTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

CCTTTGTGAATC

Flanking Amino Acid:

TSVDLVRASEVHCHYVIVKL

Intron Amino Acid Position:

530

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

1.2

75.8

34.3

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

0.65

0.9

74.1

36.3

Minor 5ss

28.4

-2.5

34.8

41.6

Minor BPS

-0.2

2.1

57.85

41.9

Associated Gene:

Gene:

ACOX1

Ensembl Gene ID:

ENSAPLG00000016081

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016817

4041697 - 4059942

18246