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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4046131_4046455_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4046131 - 4046455

Intron Length:

325

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTGCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAC

U12 Branch Point Sequence:

CTGCTACTAACT

Flanking Amino Acid:

AVRHQSELKPGEPEPQILDY

Intron Amino Acid Position:

316

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

35.3

Major BPS

76.8

0.67

0.9

75.9

Major PPT

77.6

0.62

0.9

70.2

41.3

Minor 5ss

32.5

-2

3.1

33.3

41.7

Minor BPS

47.5

-0.1

1.9

66.95

43.5

Associated Gene:

Gene:

ACOX1

Ensembl Gene ID:

ENSAPLG00000016081

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016817

4041697 - 4059942

18246