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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4046626_4047110_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4046626 - 4047110

Intron Length:

485

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGCAA

5'SS Class:

major

3'SS Sequence:

ATTTTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTGTGTTTATTT

Flanking Amino Acid:

RENMLMKYAQVEPDGTYVKP

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

68.2

38.4

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

0.97

0.7

88.8

27.4

Minor 5ss

29.4

-2.4

3.3

37.9

46.9

Minor BPS

53.7

0.19

74.92

Associated Gene:

Gene:

ACOX1

Ensembl Gene ID:

ENSAPLG00000016081

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016817

4041697 - 4059942

18246