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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4047227_4047791_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4047227 - 4047791

Intron Length:

565

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAATT

5'SS Class:

strong_major

3'SS Sequence:

TTGTGTGTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTTTTCTTAATG

Flanking Amino Acid:

RQLGTHEPLPGITVGDIGPK

Intron Amino Acid Position:

221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

27.5

Major BPS

0.92

0.9

86.2

29.1

Major PPT

0.43

1.1

65.2

45.5

Minor 5ss

38.8

-1.3

3.2

57.6

46.6

Minor BPS

83.3

0.91

1.1

82.74

31.8

Associated Gene:

Gene:

ACOX1

Ensembl Gene ID:

ENSAPLG00000016081

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016817

4041697 - 4059942

18246