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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4085980_4086118_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4085980 - 4086118

Intron Length:

139

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

GTGTCTGTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTGGAA

U12 Branch Point Sequence:

GAAAGCCAAGCC

Flanking Amino Acid:

DTLCDWDAGEVQLTRGDKYI

Intron Amino Acid Position:

426

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

75.6

33.8

Major BPS

46.4

-0.2

1.3

39.5

Major PPT

70.2

0.46

61.3

44.5

Minor 5ss

26.4

-2.7

3.5

38.5

46.7

Minor BPS

33.7

-1.2

2.1

39.05

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001088

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001173

4075908 - 4093295

17388