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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4105491_4105952_R


Intron Information:

Intron Rank:
13

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
4105491 - 4105952

Intron Length:
462

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAGAGCG

5'SS Class:
strong_major

3'SS Sequence:
GGGTCTCTTTCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTATAAC

U12 Branch Point Sequence:
GCGTGTATAACT

Flanking Amino Acid:
ESPSQVKDGKPLSERFETFC

Intron Amino Acid Position:
452

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
89.1
0.92
0.8
72.5
37.3

Major BPS
60.2
0.25
1.3
64
39.8

Major PPT
74.1
0.54
1
69.7
41.5

Minor 5ss
30.7
-2.2
3.3
39.2
46.2

Minor BPS
48
-0
2
65.02
45.6

Associated Gene:

Gene:
SRP68

Ensembl Gene ID:

Chromosome:
19

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4105263 - 4118723
13461

4104540 - 4116090
11551