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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4106006_4106833_R


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
4106006 - 4106833

Intron Length:
828

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTGAGCTCT

5'SS Class:
strong_major

3'SS Sequence:
TTAAATTTTGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTAAAT

U12 Branch Point Sequence:
TTTTCTTTAAAT

Flanking Amino Acid:
KYSLQAAAILDANDNHETES

Intron Amino Acid Position:
434

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
86.2
0.85
0.9
77.5
33.5

Major BPS
82.3
0.8
0.9
87.6
25.7

Major PPT
79.5
0.66
0.9
73.4
41.2

Minor 5ss
41
-1
3
56.7
47.6

Minor BPS
85.3
1.19
1.1
97.3
26.5

Associated Gene:

Gene:
SRP68

Ensembl Gene ID:

Chromosome:
19

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4105263 - 4118723
13461

4104540 - 4116090
11551