Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_4114998_4115976_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4114998 - 4115976

Intron Length:

979

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGAAT

5'SS Class:

strong_major

3'SS Sequence:

CTCTGCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTAAT

U12 Branch Point Sequence:

TTGTCACTAATC

Flanking Amino Acid:

KVTEEILSDNRYLLLILMDA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

78.8

36.8

Major BPS

74.4

0.61

0.9

73.6

28.6

Major PPT

76.4

0.6

0.8

69.4

31.3

Minor 5ss

32.9

-2

3.4

47.9

47.8

Minor BPS

57.1

0.2

1.9

72.4

38.7

Associated Gene:

Gene:

SRP68

Ensembl Gene ID:

ENSAPLG00000002532

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040611

4105263 - 4118723

13461

ENSAPLT00000002607

4104540 - 4116090

11551