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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4131513_4132230_R


Intron Information:

Intron Rank:
15

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
4131513 - 4132230

Intron Length:
718

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TCT|GTGAGTACC

5'SS Class:
major

3'SS Sequence:
TTCCCTCTTTAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCAAAA

U12 Branch Point Sequence:
TAGTGCAAAACT

Flanking Amino Acid:
FSRRLLSTYICKVLGNLQLN

Intron Amino Acid Position:
526

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.1
0.5
1.1
68.2
36.6

Major BPS
52.9
0.07
1.1
59.3
35.9

Major PPT
74.9
0.56
1
79
27

Minor 5ss
34.5
-1.8
2.8
48.2
40.4

Minor BPS
46.8
-0.1
2.3
69.91
46.5

Associated Gene:

Gene:
EXOC7

Ensembl Gene ID:

Chromosome:
19

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4129071 - 4149293
20223

4129105 - 4149293
20189

4129105 - 4149293
20189