Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_4132297_4134929_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4132297 - 4134929

Intron Length:

2633

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACATGCA

5'SS Class:

major

3'SS Sequence:

CTTTTCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAC

U12 Branch Point Sequence:

GGCATGTTAACT

Flanking Amino Acid:

ETAGAMLASQETSSSASSYS

Intron Amino Acid Position:

504

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

68.6

36.5

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

89.9

0.9

0.6

84.8

22.8

Minor 5ss

31.3

-2.1

3.4

41.7

44.9

Minor BPS

2.1

65.69

44.6

Associated Gene:

Gene:

EXOC7

Ensembl Gene ID:

ENSAPLG00000003256

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048245

4129071 - 4149293

20223

ENSAPLT00000033367

4129105 - 4149293

20189

ENSAPLT00000003410

4129105 - 4149293

20189