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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4173973_4174243_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4173973 - 4174243

Intron Length:

271

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

TCCCTTCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGAGGAT

U12 Branch Point Sequence:

TTTCCCTCCAGC

Flanking Amino Acid:

QEEISCPAGGGVRRHPRERE

Intron Amino Acid Position:

640

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

75.6

33.8

Major BPS

-0.4

1.4

34.8

42.2

Major PPT

79.6

0.67

0.7

72.1

32.5

Minor 5ss

26.4

-2.7

3.5

38.5

46.7

Minor BPS

48.2

-0.1

2.2

68.24

43.3

Associated Gene:

Gene:

RNF157

Ensembl Gene ID:

ENSAPLG00000004013

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004126

4173593 - 4181230

7638

ENSAPLT00000023120

4173593 - 4181230

7638