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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4174353_4174447_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4174353 - 4174447

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TAAATCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAA

U12 Branch Point Sequence:

GGTTCCTGAACC

Flanking Amino Acid:

GAQAEEKRLQVGLAELLHAA

Intron Amino Acid Position:

604

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

0.9

72.1

31.2

Major BPS

69.6

0.49

59.5

Major PPT

70.9

0.47

0.9

63.3

38.8

Minor 5ss

30.2

-2.3

3.1

36.2

34.2

Minor BPS

73.3

0.71

1.4

77.58

37.4

Associated Gene:

Gene:

RNF157

Ensembl Gene ID:

ENSAPLG00000004013

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023120

4173593 - 4181230

7638

ENSAPLT00000004126

4173593 - 4181230

7638