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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4175956_4176113_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4175956 - 4176113

Intron Length:

158

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGCG

5'SS Class:

strong_major

3'SS Sequence:

TTCCCCTCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

CGGTGTTCACCC

Flanking Amino Acid:

SHVLLATFEKHADGTFCVKP

Intron Amino Acid Position:

391

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

68.6

36.5

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

77.1

0.61

0.7

69.1

31.4

Minor 5ss

25.3

-2.8

3.1

30.1

43.1

Minor BPS

40.8

-0.7

2.1

46.36

43.2

Associated Gene:

Gene:

RNF157

Ensembl Gene ID:

ENSAPLG00000004013

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023120

4173593 - 4181230

7638

ENSAPLT00000004126

4173593 - 4181230

7638