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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4177519_4180525_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4177519 - 4180525

Intron Length:

3007

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGCACC

5'SS Class:

major

3'SS Sequence:

TCTCTCGCCCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAC

U12 Branch Point Sequence:

GGGGTCTCACCG

Flanking Amino Acid:

LNFLGNRPVLFPYAAPPPQE

Intron Amino Acid Position:

236

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

62.4

42.4

Major BPS

67.3

0.43

1.2

71.3

36.7

Major PPT

69.6

0.44

0.8

61.9

34.8

Minor 5ss

39.4

-1.2

3.1

49.4

41.2

Minor BPS

41.7

-0.7

1.9

40.32

43.7

Associated Gene:

Gene:

RNF157

Ensembl Gene ID:

ENSAPLG00000004013

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004126

4173593 - 4181230

7638

ENSAPLT00000023120

4173593 - 4181230

7638