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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4232792_4236364_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4232792 - 4236364

Intron Length:

3573

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTCCCCCCACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAG

U12 Branch Point Sequence:

TTTCCCCCCACC

Flanking Amino Acid:

LSVPAVPVREGASYGVLPRP

Intron Amino Acid Position:

412

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.3

35.8

Major BPS

55.1

0.13

1.5

54.7

43.1

Major PPT

70.8

0.47

0.9

63.3

32.9

Minor 5ss

28.1

-2.5

27.7

36.2

Minor BPS

47.5

-0.2

2.3

69.49

41.6

Associated Gene:

Gene:

SPHK1

Ensembl Gene ID:

ENSAPLG00000026651

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032634

4231558 - 4238235

6678