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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4236515_4236623_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4236515 - 4236623

Intron Length:

109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAG

U12 Branch Point Sequence:

GGGCCCGGAGCT

Flanking Amino Acid:

ADIAPSIFITERPHHAQERM

Intron Amino Acid Position:

462

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

66.2

39.6

Major BPS

48.8

-0

1.5

57.1

41.8

Major PPT

79.2

0.66

0.7

73.6

24.6

Minor 5ss

30.5

-2.2

2.8

37.9

39.5

Minor BPS

-0.6

2.2

56.34

45.1

Associated Gene:

Gene:

SPHK1

Ensembl Gene ID:

ENSAPLG00000026651

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032634

4231558 - 4238235

6678