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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4236719_4236920_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4236719 - 4236920

Intron Length:

202

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

TCCGTCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTACCAC

U12 Branch Point Sequence:

GTACCACGAGCT

Flanking Amino Acid:

VMSGDGLLHEVVNGLMERPD

Intron Amino Acid Position:

494

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

65.9

40.1

Major BPS

45.2

-0.3

1.4

52.5

42.7

Major PPT

76.1

0.59

0.8

69.4

31.3

Minor 5ss

24.4

-2.9

3.1

29.4

43.3

Minor BPS

40.1

-0.6

59.17

42.6

Associated Gene:

Gene:

SPHK1

Ensembl Gene ID:

ENSAPLG00000026651

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032634

4231558 - 4238235

6678