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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4245443_4246026_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4245443 - 4246026

Intron Length:

584

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCTT

5'SS Class:

strong_major

3'SS Sequence:

CTGTGTGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

GGCCCTTTGATG

Flanking Amino Acid:

VSLLGTWIGKGTERWTSKSS

Intron Amino Acid Position:

1067

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

78.6

37.3

Major BPS

0.85

0.9

39.9

Major PPT

0.59

72.6

42.4

Minor 5ss

31.2

-2.1

3.5

46.7

48.6

Minor BPS

50.1

-0.1

1.3

49.05

Associated Gene:

Gene:

UBE2O

Ensembl Gene ID:

ENSAPLG00000001208

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001290

4242009 - 4297709

55701