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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4253261_4254719_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4253261 - 4254719

Intron Length:

1459

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTGAGT

5'SS Class:

major

3'SS Sequence:

TTGTGACCAAAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCTTAA

U12 Branch Point Sequence:

TTTCCCCTACCA

Flanking Amino Acid:

CPGDFVVDKRAQSSQDPGVY

Intron Amino Acid Position:

624

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

42.6

Major BPS

69.7

0.49

59.9

38.5

Major PPT

54.6

0.1

1.1

54.5

39.7

Minor 5ss

40.1

-1.1

3.2

57.9

46.3

Minor BPS

59.4

0.29

77.88

38.5

Associated Gene:

Gene:

UBE2O

Ensembl Gene ID:

ENSAPLG00000001208

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001290

4242009 - 4297709

55701