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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4257851_4258656_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4257851 - 4258656

Intron Length:

806

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCTGA

5'SS Class:

strong_major

3'SS Sequence:

CTGCTTTCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTGAC

U12 Branch Point Sequence:

GTTGTCTGACCC

Flanking Amino Acid:

VLGEGSVAKKVRRLLKKQIV

Intron Amino Acid Position:

405

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.1

37.5

Major BPS

63.7

0.34

1.2

41.8

Major PPT

77.6

0.62

0.8

73.2

31.7

Minor 5ss

37.8

-1.4

47.1

48.3

Minor BPS

49.2

-0

1.8

63.34

42.2

Associated Gene:

Gene:

UBE2O

Ensembl Gene ID:

ENSAPLG00000001208

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001290

4242009 - 4297709

55701