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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4270442_4297235_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4270442 - 4297235

Intron Length:

26794

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACCGGC

5'SS Class:

major

3'SS Sequence:

TTTTCCCCCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTAAA

U12 Branch Point Sequence:

GCTCACTAAACC

Flanking Amino Acid:

GIKQHVKETKLKLEDRSVVP

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

1.2

61.5

44.8

Major BPS

65.2

0.38

0.9

65.5

27.9

Major PPT

83.9

0.76

0.7

81.9

22.9

Minor 5ss

42.2

-0.9

3.3

59.3

45.5

Minor BPS

49.9

-0

1.9

61.69

43.2

Associated Gene:

Gene:

UBE2O

Ensembl Gene ID:

ENSAPLG00000001208

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001290

4242009 - 4297709

55701