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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4309941_4310458_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4309941 - 4310458

Intron Length:

518

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

CCCCGTCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGGTGAT

U12 Branch Point Sequence:

TGTCCCTGAGCC

Flanking Amino Acid:

SAIFLPYRAEVGPAGSQFGL

Intron Amino Acid Position:

690

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

67.9

37.4

Major BPS

49.3

-0

1.5

42.8

49.4

Major PPT

66.5

0.37

0.8

56.8

33.5

Minor 5ss

24.1

-3

3.3

42.8

Minor BPS

57.6

0.22

1.7

70.35

40.2

Associated Gene:

Gene:

RHBDF2

Ensembl Gene ID:

ENSAPLG00000002889

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022185

4309521 - 4316349

6829

ENSAPLT00000002941

4309521 - 4317098

7578