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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4311553_4311688_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4311553 - 4311688

Intron Length:

136

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

CTCCCGTGCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCCAC

U12 Branch Point Sequence:

CCCCCCCCACTT

Flanking Amino Acid:

VWPDDITKWPICTYETKTNH

Intron Amino Acid Position:

548

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

67.3

36.7

Major BPS

-0.3

1.2

49.7

35.3

Major PPT

66.5

0.37

0.9

63.9

36.7

Minor 5ss

32.2

-2

3.4

43.3

Minor BPS

39.4

-0.7

49.68

44.3

Associated Gene:

Gene:

RHBDF2

Ensembl Gene ID:

ENSAPLG00000002889

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022185

4309521 - 4316349

6829

ENSAPLT00000002941

4309521 - 4317098

7578