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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4312954_4313208_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4312954 - 4313208

Intron Length:

255

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTA|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

CCTCGCTCAGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTGAC

U12 Branch Point Sequence:

CCTCGCTCAGCA

Flanking Amino Acid:

GFTQHVTTELVLRNKGVYES

Intron Amino Acid Position:

414

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

0.9

79.6

29.3

Major BPS

53.6

0.09

1.4

48.8

46.3

Major PPT

67.7

0.4

0.9

62.2

33.3

Minor 5ss

45.6

-0.5

2.8

59.8

Minor BPS

43.1

-0.5

2.1

52.78

45.3

Associated Gene:

Gene:

RHBDF2

Ensembl Gene ID:

ENSAPLG00000002889

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022185

4309521 - 4316349

6829

ENSAPLT00000002941

4309521 - 4317098

7578