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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4315912_4316034_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4315912 - 4316034

Intron Length:

123

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

CCCTGCCTCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

CGTTCCTGACGC

Flanking Amino Acid:

EAEEDGARKEPTKAPIYRKS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

72.2

39.5

Major BPS

68.9

0.47

59.2

39.1

Major PPT

70.3

0.46

0.8

60.6

35.3

Minor 5ss

34.3

-1.8

2.9

44.2

Minor BPS

47.5

-0.2

2.1

59.68

45.2

Associated Gene:

Gene:

RHBDF2

Ensembl Gene ID:

ENSAPLG00000002889

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022185

4309521 - 4316349

6829

ENSAPLT00000002941

4309521 - 4317098

7578