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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4335839_4342157_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4335839 - 4342157

Intron Length:

6319

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTAAA

5'SS Class:

major

3'SS Sequence:

CCTCTCTCCGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTCAT

U12 Branch Point Sequence:

ATCTCCTCACTG

Flanking Amino Acid:

CEDVGVSVLIRFFVNFPSAK

Intron Amino Acid Position:

176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.69

77.8

31.4

Major BPS

69.6

0.49

1.3

73.6

41.8

Major PPT

66.2

0.36

26.6

Minor 5ss

41.2

-1

2.5

45.5

Minor BPS

49.8

-0.1

1.9

57.67

44.4

Associated Gene:

Gene:

CYGB

Ensembl Gene ID:

ENSAPLG00000003674

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034260

4334869 - 4443846

108978

ENSAPLT00000003754

4333485 - 4342756

9272