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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4376649_4376755_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4376649 - 4376755

Intron Length:

107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

CGTCCCGTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAC

U12 Branch Point Sequence:

AGGCGCTCACCG

Flanking Amino Acid:

LLTALHTCDQVSAYGFITGN

Intron Amino Acid Position:

347

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

35.3

Major BPS

57.5

0.19

1.1

60.7

37.6

Major PPT

62.5

0.28

1.1

57.2

38.6

Minor 5ss

33.8

-1.8

2.9

43.7

43.6

Minor BPS

39.4

-0.9

2.1

40.27

43.3

Associated Gene:

Gene:

ST6GALNAC2

Ensembl Gene ID:

ENSAPLG00000029589

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025834

4376481 - 4380017

3537

ENSAPLT00000026973

4376481 - 4384081

7601