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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4379887_4383956_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4379887 - 4383956

Intron Length:

4070

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGCG

5'SS Class:

strong_major

3'SS Sequence:

TGTCCCCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTCAT

U12 Branch Point Sequence:

CTCCCCTCATCC

Flanking Amino Acid:

ELPAGQRIIASLLQPEPLLL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

70.5

38.9

Major BPS

0.5

1.1

71.2

35.2

Major PPT

80.2

0.68

0.8

73.5

31.4

Minor 5ss

29.5

-2.3

3.4

38.5

46.7

Minor BPS

-0.1

1.9

59.93

Associated Gene:

Gene:

ST6GALNAC2

Ensembl Gene ID:

ENSAPLG00000029589

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026973

4376481 - 4384081

7601