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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4394287_4394827_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4394287 - 4394827

Intron Length:

541

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTCCG

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTGTCTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

TGTTCATTAATG

Flanking Amino Acid:

KGFSKIPRGKHIRYIHFLEG

Intron Amino Acid Position:

424

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

69.1

41.8

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

80.8

0.69

0.8

80.5

31.5

Minor 5ss

36.2

-1.6

2.9

43.1

37.6

Minor BPS

69.9

0.48

1.6

73.64

38.6

Associated Gene:

Gene:

ST6GALNAC1

Ensembl Gene ID:

ENSAPLG00000021298

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023360

4390785 - 4409676

18892