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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4395721_4399327_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4395721 - 4399327

Intron Length:

3607

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGCGTG

5'SS Class:

major

3'SS Sequence:

CTTGTTTTTCAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CCCTTTTTATCT

Flanking Amino Acid:

YLLDSSAPPATCSESVKAKA

Intron Amino Acid Position:

264

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

67.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

76.4

0.59

74.9

Minor 5ss

40.4

-1.1

3.4

56.3

47.9

Minor BPS

54.4

0.22

1.6

66.05

45.6

Associated Gene:

Gene:

ST6GALNAC1

Ensembl Gene ID:

ENSAPLG00000021298

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023360

4390785 - 4409676

18892