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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_4466457_4466797_F

Intron Information:

Intron Rank:
3
Intron Class:
major
Intron Phase:
1
Intron Coordinates:
4466457 - 4466797
Intron Length:
341

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTAGGGTGA
5'SS Class:
major
3'SS Sequence:
CCCAACTATGCAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TAATGAA
U12 Branch Point Sequence:
ATTGCTTTATCT
Flanking Amino Acid:
LGSDVFFDPKDFEDILTTVY
Intron Amino Acid Position:
141

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
79.3
0.69
1
66.6
41.6
Major BPS
67.7
0.44
1
58
38.9
Major PPT
64.8
0.33
1
57.5
37.2
Minor 5ss
34.7
-1.7
3.5
46.6
48.7
Minor BPS
65.2
0.56
1.7
81.9
40

Associated Gene:

Gene:
METTL23
Ensembl Gene ID:
ENSAPLG00000004169
Chromosome:
19

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000004268
4464963 - 4469043
4081