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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4655539_4655792_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4655539 - 4655792

Intron Length:

254

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCTTG

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTTTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAA

U12 Branch Point Sequence:

TTCTTTTTAAAG

Flanking Amino Acid:

MKQYTSNIKKGKEIIEYYLK

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.9

74.8

38.1

Major BPS

0.3

62.3

30.4

Major PPT

0.68

81.5

27.8

Minor 5ss

-0.9

49.2

Minor BPS

65.8

0.36

1.5

67.62

40.4

Associated Gene:

Gene:

SEC14L1

Ensembl Gene ID:

ENSAPLG00000005887

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028608

4629824 - 4669849

40026

ENSAPLT00000006149

4629852 - 4671860

42009