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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4657829_4660724_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4657829 - 4660724

Intron Length:

2896

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGCTCT

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTTATTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TTCTTGTTATTC

Flanking Amino Acid:

YAGGWHHHDKDGRPLYVLRL

Intron Amino Acid Position:

337

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

74.1

37.2

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

82.6

0.73

0.9

35.7

Minor 5ss

59.1

0.31

2.3

74.3

Minor BPS

48.6

-0.1

2.2

64.92

41.8

Associated Gene:

Gene:

SEC14L1

Ensembl Gene ID:

ENSAPLG00000005887

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028608

4629824 - 4669849

40026

ENSAPLT00000006149

4629852 - 4671860

42009