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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4660814_4661895_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4660814 - 4661895

Intron Length:

1082

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAC|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTGGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAA

U12 Branch Point Sequence:

TTTTCTTGGACA

Flanking Amino Acid:

ALGEEALLRYVLSINEEGLR

Intron Amino Acid Position:

367

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

1.2

85.2

32.2

Major BPS

0.57

73.6

28.6

Major PPT

77.7

0.62

Minor 5ss

-1.1

3.4

57.4

40.7

Minor BPS

72.7

0.71

1.4

83.14

30.7

Associated Gene:

Gene:

SEC14L1

Ensembl Gene ID:

ENSAPLG00000005887

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028608

4629824 - 4669849

40026

ENSAPLT00000006149

4629852 - 4671860

42009