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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4661967_4663615_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4661967 - 4663615

Intron Length:

1649

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATAC

5'SS Class:

strong_major

3'SS Sequence:

CTCTGAAACTTAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TCTCTCTGAAAC

Flanking Amino Acid:

ENTKVFGRPISSWTCLVDLE

Intron Amino Acid Position:

390

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

74.5

29.8

Major BPS

100

1.24

0.5

100

Major PPT

58.7

0.2

0.9

55.9

38.2

Minor 5ss

37.6

-1.4

3.2

49.9

46.6

Minor BPS

56.1

0.17

1.6

65.83

39.3

Associated Gene:

Gene:

SEC14L1

Ensembl Gene ID:

ENSAPLG00000005887

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028608

4629824 - 4669849

40026

ENSAPLT00000006149

4629852 - 4671860

42009