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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4705265_4706613_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4705265 - 4706613

Intron Length:

1349

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTACTCCTG

5'SS Class:

weak_major

3'SS Sequence:

ATTTGTATTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTAAAT

U12 Branch Point Sequence:

TGTTGCGGAATT

Flanking Amino Acid:

PLGWTSSYSSGSAWSTDSSG

Intron Amino Acid Position:

1705

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.2

0.24

1.2

49.3

46.7

Major BPS

73.5

0.58

79.3

29.4

Major PPT

76.8

0.6

0.9

71.2

Minor 5ss

40.6

-1

3.3

53.2

45.8

Minor BPS

46.9

-0.1

2.4

73.4

43.7

Associated Gene:

Gene:

TNRC6C

Ensembl Gene ID:

ENSAPLG00000005456

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005667

4702793 - 4757735

54943