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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4706809_4709306_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4706809 - 4709306

Intron Length:

2498

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGAAAA

5'SS Class:

strong_major

3'SS Sequence:

CGTTCTGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

AATACACTAATT

Flanking Amino Acid:

SSIASAPSIAGKLSDIKSTW

Intron Amino Acid Position:

1640

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

77.1

33.2

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

78.7

0.65

0.9

72.5

37.6

Minor 5ss

31.7

-2.1

3.1

39.8

45.8

Minor BPS

49.5

0.04

1.9

71.02

39.2

Associated Gene:

Gene:

TNRC6C

Ensembl Gene ID:

ENSAPLG00000005456

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005667

4702793 - 4757735

54943