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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4709424_4712359_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4709424 - 4712359

Intron Length:

2936

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAACACA

5'SS Class:

strong_major

3'SS Sequence:

GCTGGTTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAG

U12 Branch Point Sequence:

TCTTTCTTAGTT

Flanking Amino Acid:

DVNRYLLKSGGSSPTSSQNA

Intron Amino Acid Position:

1601

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

36.5

Major BPS

67.5

0.43

1.5

65.7

43.2

Major PPT

72.8

0.51

65.3

41.1

Minor 5ss

-1.2

2.9

49.8

46.2

Minor BPS

69.9

0.7

1.5

83.07

38.8

Associated Gene:

Gene:

TNRC6C

Ensembl Gene ID:

ENSAPLG00000005456

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005667

4702793 - 4757735

54943