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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4716030_4716355_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4716030 - 4716355

Intron Length:

326

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAGGTTTG

5'SS Class:

major

3'SS Sequence:

CTTTTGTTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

CATTTATTGATT

Flanking Amino Acid:

SGPMRQQEQQVARTINNMQQ

Intron Amino Acid Position:

1356

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

72.5

39.9

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

78.3

0.64

72.6

42.4

Minor 5ss

44.1

-0.6

3.1

57.5

41.6

Minor BPS

0.3

1.6

72.23

Associated Gene:

Gene:

TNRC6C

Ensembl Gene ID:

ENSAPLG00000005456

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005667

4702793 - 4757735

54943