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Intron Name: Anas_platyrhynchos_platyrhynchos_19_4727108_4727754_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4727108 - 4727754

Intron Length:

647

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTAGT

5'SS Class:

major

3'SS Sequence:

CTGTTTTTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

TTTCTCTTAACA

Flanking Amino Acid:

IKQLTDMGFPREPAEEALKS

Intron Amino Acid Position:

1115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

71.2

40.3

Major BPS

0.52

1.1

77.7

35.3

Major PPT

78.3

0.64

75.6

38.3

Minor 5ss

34.9

-1.7

2.9

52.3

44.3

Minor BPS

1.06

88.68

27.3

Associated Gene:

Gene:

TNRC6C

Ensembl Gene ID:

ENSAPLG00000005456

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005667

4702793 - 4757735

54943